Jijun Tang

Jijun Tang
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Jijun Tang
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Computer Science - Data Structures and Algorithms (2)
 
Quantitative Biology - Biomolecules (1)
 
Computer Science - Learning (1)
 
Quantitative Biology - Quantitative Methods (1)
 
Quantitative Biology - Genomics (1)

Publications Authored By Jijun Tang

The edit distance under the DCJ model can be computed in linear time for genomes with equal content or with Indels. But it becomes NP-Hard in the presence of duplications, a problem largely unsolved especially when Indels are considered. In this paper, we compare two mainstream methods to deal with duplications and associate them with Indels: one by deletion, namely DCJ-Indel-Exemplar distance; versus the other by gene matching, namely DCJ-Indel-Matching distance. Read More

Background: It is necessary and essential to discovery protein function from the novel primary sequences. Wet lab experimental procedures are not only time-consuming, but also costly, so predicting protein structure and function reliably based only on amino acid sequence has significant value. TATA-binding protein (TBP) is a kind of DNA binding protein, which plays a key role in the transcription regulation. Read More

The graph exploration problem is to visit all the nodes of a connected graph by a mobile entity, e.g., a robot. Read More